The Heart of the Lab

Paul Delgado Olguín, PhD
Paul Delgado Olguín, PhDPrincipal Investigator
Lijun Chi, PhD
Lijun Chi, PhDResearch Associate

Translational Medicine, SickKids Research Institute

Dr. Chi enormously contributes in multiple aspects to all the projects in our lab. In addition, Dr. Chi is investigating the function of histone methyltransferases that form part of epigenetic silencing complexes in the development of cardiovascular precursor cells and their descendants.

Jielin Yang
Jielin YangClinical Research Project Assistant

Translational Medicine, SickKids Research Institute

Jielin is investigating the link between chromatin structure and gene expression dynamics during cardiac maturation. By generating and cross-referencing multiple transcriptomics and epigenomics datasets from mouse cardiomyocytes with mutations in various chromatin modifiers, Jielin aims to uncover the basis of the heart’s adaptation during the fetal to postnatal transition.

Amalia Caballero
Amalia CaballeroPhD Candidate

Department of Molecular Genetics, U of T

Amalia is investigating how obesity during pregnancy affects gene expression in the early developing embryo. Amalia employs single-cell genome wide approaches to uncover regulatory mechanisms of disease programming.

Adar Aharon-Yariv
Adar Aharon-YarivPhD Candidate

Department of Molecular Genetics, U of T

Adar is delving into the interplay between transcription factors and chromatin modifiers that control cardiac metabolism. Adar is applying multiple epigenomics approaches to map transcription factor occupancy and chromatin structure in regulatory elements controlling cardiac metabolism in homeostasis and heart failure.

Amaury Aguilar Lomas
Amaury Aguilar LomasPhD Candidate

Biochemical Sciences. Fellow student co-supervised with Dr. Mayra Furlan-Magaril at Universidad Nacional Autónoma de México

Amaury is focused on deciphering the elements that make it possible for regulatory elements located far apart in the DNA, to come together and regulate gene expression in developing endothelial cells and cardiomyocytes. Amaury applies chromatin conformation capture approaches to endothelial cells in mutant mouse models to reveal mechanisms of cardiovascular development.

Daniel Patolsky
Daniel PatolskyMSc Student

Department of Molecular Genetics, U of T

Daniel is investigating the consequences of ectopic activation of a family of RNA binding proteins in the heart. Daniel is developing gain-of-function systems to identify mRNAs bound by these proteins and reveal their effect on translation. Daniel’s work will provide insight into the post-transcriptional control of cardiomyocyte growth in both health and in response to pathological stimuli.

Hamna Ahmar
Hamna AhmarUndergraduate Student

Honors Bachelor of Science, Health & Disease, Animal Physiology at Woodsworth College, U of T

Hamna is characterizing the cardiac phenotype of mouse embryos in which the histone methyltransferase Ezh2 is inactive in a subpopulation of cardiac progenitor cells. Hamna also uses genetic tools to label and isolate mutant cardiac progenitors and their descendants to analyze gene expression and chromatin structure at single cell resolution.

Bei Yan
Bei YanUndergraduate Student

Honors Bachelor of Science, Neuroscience, Immunology, Physiology, U of T

Bei is developing a loss-of-function model to investigate the consequences of abnormal activation of transcription factors upon the deletion of epigenetic repressors in cardiomyocytes. Bei is testing the efficiency of morpholino oligonucleotides to knock down suppressors of cardiac metabolism, aiming to prevent cardiac deterioration and progression toward heart failure.

Cristina Mate
Cristina MateAdministrative Cordinator

Translational Medicine, SickKids Research Institute

Cristina is our point of contact for logistics, onboarding, and navigating the Research Institute’s policy.

Alumni

Research Fellows

Abdalla Ahmed, PhD

Abdalla discovered a pathway controlled via histone demethylation and that is dysregulated to initiate cardiac deterioration leading to heart failure.

Present position: Consultant, biotech industry

Graduate Students

Ling Zhong, MD, PhD

Fellow student supervised by Professor Ming Li at the Peking Union Medical College. Graduated with a PhD in Internal Medicine

Jibran Nehal Syed

Graduated from the MSc program in the Department of Molecular Genetics, U of T

Thesis: The Polycomb Group Protein L3MBTL2 Controls Postnatal and Pathological Cardiac Hypertrophy

Position after graduation: Consultant, biotech industry

Quetzalcoatl Escalante Covarrubias, PhD

Fellow student supervised by Dr. Lorena Aguilar-Arnal. Graduated from the Biomedical Sciences progam, Universidad Nacional Autónoma de México

Abdalla Ahmed, PhD

Graduated from the PhD Program in the Department of Molecular Genetics at U of T Abdalla investigated the earliest effects of obesity during pregnancy on the developing heart and the molecular events that program an increased risk of adult-onset heart disease.

Thesis: Transcriptional Origins of Adult Cardiac Disease in Response to Maternal Obesity.

Position after graduation: Research Fellow, The Hospital for Sick Children

Anna Roy

Graduated from the MSc program in the Department of Molecular Genetics, U of T

Thesis: CCCTC-binding Factor (Ctcf) is Required for Mouse Cardiovascular Development.

Position after graduation: Project Coordinator, The Hospital for Sick Children

Sandra Vuong

Graduated from the MSc program in the Department of Molecular Genetics, U of T

Thesis: Loss of L3mbtl2 in Cardiac Progenitor Cells Causes Subtle Defects in the Developing Heart Leading to Cardiac Dysfunction in Adulthood.

Position after graduation: MD Candidate, Australia

Undergraduate Research Students

Raina Cui

Research Student, Advanced Research Project in Molecular Genetics, U of T

Jasmine Li

Research Student, Advanced Research Project in Molecular Genetics, U of T

Position after graduation: Student MSc program in Genetic Counseling, U of T

Sofia Wang

Position after graduation: PhD Student in the Department of Molecular Genetics, U of T

Mabel Yang

Research Student, Special Research Project, Department of Molecular Genetics, U of T

Evonne Anin

Research Student

Etri Kocaqi

Position after graduation: Medical School, McMaster University

Dorothy Lee

Position after graduation: Student in the PhD program in the Department of Physiology, U of T

Tao Wang

Position after graduation: Student in the MSc program in the Department of Physiology, U of T

Meaghan Leslie

Position after graduation: Graduate Student in the MSc program in the Department of Molecular Genetics, U of T

Ryan Tracey

Alicia Jarosz

Position after graduation: MD Candidate, University of Alberta

Volunteers

Sina Fatehi Someeh

Position after graduation: Student in the MSc program in the Department of Medical Science, U of T


Angela Chen

Position after graduation: Undergraduate Student, U of T


Angela An Qi Duan

Position after graduation: Student in the MSc program in the Department of Medical Science, U of T